BIO 2500 Class Discussion and Laboratory Schedule

Fall, 2010*


Special Resources:

A Reading-Study Plan
Project Due Dates
Internet Botany
Stewardship Links

Select from the following course units:

Part I - Field Botany and Ecology  - August 25 to September 27

Part II - Survey of "Simpler Autotrophs"
- September 28 to October 25

Part III - Vascular Plant Phyla - October 26 to  November 8

Part IV - Plant Anatomy and Physiology- November 9 to December 17



   
DATE
 Study Assignment
     TO P I C
   DETAIL
PART   I   Field Botany and Ecology  
 August 25  SA #1  "People Matters" -- Because People Do Matter*  
 August 27  SA #2  Course Introduction  
 August 30  SA #3  Botany and Stewardship of the "Green World"  
 Aug. 31,Sept 1,2  LAB #1  Field Botany - Introduction  Manual, Ex. #1
 September 1  SA #4 Botany and Stewardship - Tapping the Knowledge Base  
 September 3  SA #5 Botany / Ecology & Human Culture: Roundup... Web Resources
 September 6 No Classes   Labor Day  
 September 7, 8, 9  LAB #2  Woody Plants & Sampling Plant Populations  Manual, Ex. #2
 September 8 SA #6  Ecology - Investigating Life in Context  
 September 10, 13  SA #7-8 Characterizing Biotic Communities  
 Sept. 14,15,16  LAB #3  Prairie Community Structure and Diversity  Manual, Ex. #3
 September 15, 17  SA #9 -10  Scientific Investigations and Data Analysis  
 September 20  SA #11  Prairie Community Data Analysis / Discussion  
 Sept. 21,22,23  LAB #4  Autotrophic Prokaryotes & Protists Manual, Ex. #7
 September 22   No Lecture Day of Prayer  
 September 24  SA #12  Concluding Discussion / Review Guide and also Supplement  
 September 27  EXAM   I  [SA #1 to SA #12 and Labs #1– #3]  
PART  II    Survey of "Simpler Autotrophs"  
 Sept. 28, 29, 30  LAB #5  Autotrophic Protists  Manual, Ex. #7
 Sept. 29, Oct 1  SA #14-15  Plant Origins and Classification  
 October 4, 6  SA #16-17  Autotrophic Prokaryotes: Cyanobacteria & Chloroxybacteria Internet Botany
 October 5, 6, 7  LAB #6  Bryophytes & BLIP Project Consultation and Progress Ex. #8, Pts. A, B
 October 8, 11  SA #18-19  Autotrophic Protists: Algae  
 October 12, 13, 14    No Structured Labs (BLIP Consultations as Necessary)  
 October 13  SA #20  Plant Cells, Cell Walls, and Cytokinesis  
 Oct. 14 - 17 No Classes  Fall Break  
 October 18  SA #21  Bryophytes and the Origin of Land Plants
 Oct. 19, 20, 21  LAB #7  Seedless Vascular Plants and Gymnosperms Ex. #8-C.,D. Ex 9
 October 20  SA #22  Botany, Agriculture, & Missions  
 October 22 #SA 23  Concluding Discussion & Review --  Review Strategies  
 October 25  Exam II Coverage [SA #14 to SA #22 and Lab Ex. #7 and 8(part)]  
PART  III    Survey of Vascular Plant Phyla  
 Oct. 26, 27, 28  LAB #8  Angiosperms  
 October 27 #SA 24 Ferns and Other Seedless Vascular Plants  
 October 29 #SA 25 Gymnosperms: Origin of Seed Plants  
 November 1 #SA 26 Plant Tissue Types  
 November 2, 3, 4  LAB #9 Plant Cells, Roots, and Water Relations Manual, #11, 12
 November 3 #SA 27 Angiosperms: Flower to Fruit and Seeds [& Botany Careers]  
 November 5 #SA 28 Plant Growth: Apical and Lateral Meristems  
    Concept Map: Vascular Plant Development  
 November 8 #SA 28 cont'd Review Strategies [SA #14 to SA #27; Lab Ex. #7 thru #10]  
 November 9,10,11  LAB #10 Stems and Histology Manual, #13
 November 10 Exam III [SA #14 to SA #27; Lab Ex. #7 thru #10]  
PART  IV  Plant Anatomy and Physiology  
 November 12 #SA 30 Introduction to Plant Water Relations  
 November 15,17 #SA 31-32 Movement of Water in Plants - "SPAC"  
 November 16,17,18  LAB #11 Leaves and Leaf Adaptations to Environment Manual, #14
 November 19,22 #SA 33-34 Photosynthesis I -- Photochemistry  
 November 24 Lecture BLIP Consultations (Meeting as Necessary)  
 Nov 24(1p) - Nov 29 No Classes Thanksgiving Break  
 Nov. 30, Dec. 1, 2  LAB #12 BLIP Completion -- Consultations and Interviews Manual, #15
 December 1 #SA 35 Photosynthesis II -- Biochemical Reactions  
 December 3 #SA 36 Photosynthesis II -- Biochemical Reactions (continued) Animations
 December 6 Transition Lecture Conclusion; Possible BLIP Oral Presentation Manual, #15
 December 7, 8, 9 LAB #13 BLIP Completion - Consultations and Interviews Manual, #15
 December 8,10,13 Oral Reports BLIP Oral Presentations (Manual, page 15.3 and following)  
 Dec. 17, 8:00 am Exam IV Plant Anatomy & Physiology[SA #26, 28, 30 to 36; Labs #11 to 14]
(Review Strategies)
 

*Subject to change in the event of unforseen conflicts; study assignments may be revised up to within 24 hours
before the scheduled date so it is best not to print Study Assignments too far ahead of the scheduled date.
 
 

Internet Links in Botany: Illustrations, Tutorials, and Discoveries in Plant Science

Development and Importance of Botany

Botanical Society of America
American Society of Plant Biologists
New Topics in Botany - Weekly -- Bryan Ness
Beltsville Agricultural Research Center-- USDA Research near Washington, DC.

Plant Cells and Reproduction

Mitosis -- Tutorial (Cornell University)
Mitosis - DNA Coiling into Chromosomes -- Animation (W.H. Freeman Co.)
Mitosis and Cytokinesis - McGraw Hill Animation

Plant Origins and Diversity

Answers in Genesis
Institute for Creation Research -- Publishers of "Impact" articles, with searchable by Subject Index
Creation Research Society -- Creation Research;   Journal:  Creation Research Society Quarterly
An Evolution Perspective:  The Tree of Life -- David R. Maddison and Wayne P. Maddison.
Access Research Network:  Origins Articles from Intelligent Design Scholars -- e.g. Michael Behe, Jonathan Wells
Hugh Ross' Reasons to Believe -- Example of  a  "Day-Age' approach to Genesis 1-2
 

Systems of Classification

Baraminology Study Groupup -- Applications of Discontinuity Systematics
Discontinuity Systematics and Walter ReMine's Biotic Message

The Origin of Biological Information and the Higher Taxonomic Categories -- by Stephen C. Meyer
PhyloCode Home Page
--
An Alternative to the Linnaean Classification
"Tree of Life" Web Project
--  Internet project in phylogeny and biodiversity
What Is Plant Systematics and Why Is It Important?  --
Dr. John Freudenstein,  The OSU Herbarium

Bacteria and Beginnings


New Classification of Archaea and Eubacteria

The Archaea - Lifes Extremists

The Eubacteria
The Cyanoacteria
Video of Cyanobacterium Escaping a Ciliate

Algae: Autotrophic Protists

Images of Chlorophyta
--
e.g. Spirogyra, Oedogonium, Chara, Clamydomonas, Ulva, Ulothrix    
Euglenophyta --
e.g. Euglena
Dinophyta (or Pyrrophyta) -- Dinoflagellates
Chromophyta (or Phaeophyta) -- Brown Kelp (e.g. Nereocystis) with bladder, stipe, and holdfast
Rhodophyta -- Red Algae (e.g. Porphyra) (Yum! used in flavoring soups, wrapping around rolls of rice)


Kingdom Fungi and Lichens

Myxomycota -- Slime Molds
Chytrids (Chytridomycota) -- What are Chytrids anyway?
Zygomycota -- represented by bread mold ( Rhizopus) shown here with asexual sporangium and diploid zygospore
Ascomycota -- the Sac Fungi have microscopic sac-like asci (site of meiosis) which are produced in ascocarps
Basidiomycota -- the "Club Fungi" include many mushrooms and bear their spores on club-like basidia following meiosis.
dddddddddddd -- Basidia are borne on gills of the mushroom
Deuteromycota -- Links to Image Files of Imperfect Fungi
Lichen -- Image Files

Introduction to Plant Kingdom - Bryophytes

Bryophytes -- Lots of links to photos of Mosses, Liverworts, and Hornworts (University of Wisconsin)

Seedless Vascular Plants -- Ferns, Clubmosses, Horsetails, Whisk Ferns

Psilotophyta -- Psilotum or Whisk Fern
>>> Additional Images of Psilotaceae
Lycopodophyta -- Clubmosses, Spike Mosses
Equisetophyta(Sphenophyta) -- Horsetails
    Equisetum Spores -- mechanism for dispersal
Polypodiophyta (Pteridophyta)-- Ferns

Introduction to Seed Plants -- Gymnosperms

Pinophyta(Coniferophyta) Pines, Spruces, Firs, Hemlocks, Cedars
Cycadophyta -- the Cycads
Ginkgophyta -- represented by Ginkgo biloba as the only species!
Gnetophyta-- including Ephedra (photo) and Welwitschia
Gymnosperm Characteristics: OvuleFemale Cones   Male Cones    Pollen Tube

Webpage Under Construction from here down (links need repair)

Angiosperms -- Fruit-bearing Plants

Anthophyta -- Life Cycle Overview
Fruit Key: California State University-Stanislaus
Fruits -- Slide Collection (University of Wisconsin)
Early Stages of Development -- Capsella

Economic Botany

Nikolai Vavilov Institute -- A New Threat from the Kremlin
U.S. Department of Agriculture, Agricultural Research Service
Rational Phytotherapy:  A Physicians Guide to Herbal Medicine (Centennial Library)
Herb World News Online


Plant Cells

Nucleus, Chloroplasts, Mitochondria, Vacuole-- Electron Micrograph
Chloroplasts -- in Moss Protonema
Chloroplast-- EM view of grana and stroma thylakoids
Amyloplasts-- with starch grains in potato
Chromoplasts -- in Marigold flower petals
Nuclei of Elodea Cells-- light microscope view
Endoplasmic Reticulum and Polysomes
Microtubules-- associated with Cell Wall
Middle Lamella and Plasmodesmata -- Persimmon (Diospyros)  endosperm at ~1000x.

Plant Tissues -- Slides from Botany Department, University of Wisconsin

Parenchyma -- pith in Coleus stem x-section; starch grains (stained)
Collenchyma -- in Coleus stem x-section
Sclerenchyma -- fibers of Tilia americana stem
Sclerenchyma -- sclerids (stone cells) in Pear Fruit
Early Stages of Development -- Capsella
Slides at Botany Home Page -- click HERE


Leaves --

Dicot Leaf Venation
--  net, palmate, pinnate
Monocot Leaf Form -- with blade and sheath
      Slides from Botany Department, University of Wisconsin:
Lilac (Syringa) leaf -- cross section
Upper Epidermis and Palisade Mesophyll -- Syringa leaf
Corn (Zea mays) Leaf -- cross section
Pine (Pinus sp.) Leaf -- cross section
Pine (Pinus sp.) -- sunken stomata

Photosynthesis -- Animations

Light Reactions - by Graham R. Kent, Smith College
Calvin Cycle (Carbon Fixation) - by Graham R. Kent, Smith College
Light Reactions - University of Alberta

Stems --
Slides from Botany Department, University of Wisconsin

Coleus
Shoot
--
apical region with leaf primordia
Alfalfa (Medicago) Stem -- cross section
Potato (Solanum) Tuber-- modified stem with nodes (see "eyes")
Corn (Zea) Stem -- cross section